Statistics
PROMPT can use either the free R-package (www.r-project.org) or the commercial S-PLUS package for statistical calculations. One of these has to be installed.Proxy
To retrieve data from remote resources, e.g. downloading protein sequences, it may be necessary to use a proxy server.Database
Connections to a database from inside PROMPT will use these settings as default.MiscHost - host name, where the database can be reached
User Name - username to connect to the database
Password - password to connect to the database
JDBC Driver - driver used for this connection
Miscellaneous settings can be made here.